Convert an object to a pf object

Convert an object to a pf object

Usage

pf_as_pf(x, ...)

Arguments

x

An object to convert

...

Other arguments pass to or from other methods.

Value

a pf object with branch lengths as features

Examples

pf_as_pf(ape::rtree(100))
#> # A tibble: 198 × 3
#>    label is_tip phlo                                                            
#>    <chr> <lgl>  <pfc>                                                           
#>  1 t9    TRUE   ◎── 0.93──→ Node2 ── 0.74──→ Node3 ── 0.80──→ t9                
#>  2 t13   TRUE   ◎── 0.93──→ Node2 ── 0.74──→ No…── 0.73──→ Node5 ── 0.17──→ t13 
#>  3 t62   TRUE   ◎── 0.93──→ Node2 ── 0.74──→ No…── 0.73──→ Node5 ── 0.42──→ t62 
#>  4 t95   TRUE   ◎── 0.93──→ Node2 ── 0.74──→ No…── 0.27──→ Node4 ── 0.82──→ t95 
#>  5 t37   TRUE   ◎── 0.93──→ Node2 ── 0.95──→ No…── 0.11──→ Node7 ── 0.36──→ t37 
#>  6 t82   TRUE   ◎── 0.93──→ Node2 ── 0.95──→ No…── 0.11──→ Node7 ── 0.34──→ t82 
#>  7 t79   TRUE   ◎── 0.93──→ Node2 ── 0.95──→ No…── 0.36──→ Node9 ── 0.83──→ t79 
#>  8 t76   TRUE   ◎── 0.93──→ Node2 ── 0.95──→ No…─ 0.28──→ Node10 ── 0.73──→ t76 
#>  9 t67   TRUE   ◎── 0.93──→ Node2 ── 0.95──→ No…─ 0.28──→ Node10 ── 0.31──→ t67 
#> 10 t45   TRUE   ◎── 0.93──→ Node2 ── 0.95──→ No…── 0.54──→ Node8 ── 0.11──→ t45 
#> # ℹ 188 more rows