Make a pfc object from a phylo object

Make a pfc object from a phylo object

Usage

pf_as_pfc(x, ...)

Arguments

x

A phylogenetic tree in ape::phylo format

...

Arguments passed to or from other methods

Value

a pfc

Examples

pf_as_pfc(ape::rtree(100))
#> <pfc<e:198>[198]>
#> First  10 phylogenetic flows: 
#> [1] ◎──0.661──→ Node2 ──0.790──→ Node3 ──0.931──→ Node4 ──0.544──→ Node5 ──0.083──→ Node6 ──0.885──→ t15 
#> 
#> [2] ◎──0.661──→ Node2 ──0.790──→ Node3 ──0.931──→ Node4 ──0.544──→ Node5 ──0.083──→ Node6 ──0.324──→ t84 
#> 
#> [3] ◎── 0.66──→ Node2 ── 0.79──→ Node3 ── 0.93──→ Node4 ── 0.54──→ Node5 ── 0.17──→ Node7 ── 0.45──→ Node8 ── 0.54──→ Node9 ── 0.18──→ t4 
#> 
#> [4] ◎── 0.66──→ Node2 ── 0.79──→ Node3 ── 0.93──→ Node4 ── 0.54──→ Node5 ── 0.17──→ Node7 ── 0.45──→ Node8 ── 0.54──→ Node9 ── 0.48──→ t17 
#> 
#> [5] ◎──0.661──→ Node2 ──0.790──→ Node3 ──0.931──→ Node4 ──0.544──→ Node5 ──0.167──→ Node7 ──0.449──→ Node8 ──0.071──→ Node10 ──0.779──→ t31 
#> 
#> [6] ◎──0.661──→ Node2 ──0.790──→ Node3 ──0.931──→ Node4 ──0.544──→ Node5 ──0.167──→ Node7 ──0.449──→ Node8 ──0.071──→ Node10 ──0.525──→ t51 
#> 
#> [7] ◎── 0.66──→ Node2 ── 0.79──→ Node3 ── 0.93──→ Node4 ── 0.54──→ Node5 ── 0.17──→ Node7 ── 0.20──→ t65 
#> 
#> [8] ◎──0.661──→ Node2 ──0.790──→ Node3 ──0.931──→ Node4 ──0.885──→ Node11 ──0.064──→ Node12 ──0.712──→ Node13 ──0.706──→ Node14 ──0.915──→ t86 
#> 
#> [9] ◎──0.661──→ Node2 ──0.790──→ Node3 ──0.931──→ Node4 ──0.885──→ Node11 ──0.064──→ Node12 ──0.712──→ Node13 ──0.706──→ Node14 ──0.493──→ t93 
#> 
#> [10] ◎──0.661──→ Node2 ──0.790──→ Node3 ──0.931──→ Node4 ──0.885──→ Node11 ──0.064──→ Node12 ──0.712──→ Node13 ──0.395──→ t22