Extracts the phylogenetic flow column of an pf
object
pf_phyloflow.Rd
Extracts the phylogenetic flow column of an pf
object
Examples
pf_phyloflow(avonet)
#> <pfc<e:13338>[13338]>
#> First 10 phylogenetic flows:
#> [1] ◎── 24.5──→ Node2 ── 27.9──→ Node3 ── 7.5──→ Node4 ── 42.1──→ Node5 ── 8.1──→ Rhea_americana
#>
#> [2] ◎── 24.5──→ Node2 ── 27.9──→ Node3 ── 7.5──→ Node4 ── 42.1──→ Node5 ── 8.1──→ Rhea_pennata
#>
#> [3] ◎── 24.5──→ Node2 ── 27.9──→ Node3 ── 7.5──→ Node4 ── 7.7──→ Node6 ── 33.8──→ Node7 ── 7.4──→ Node8 ── 1.3──→ Apteryx_australis
#>
#> [4] ◎── 24.5──→ Node2 ── 27.9──→ Node3 ── 7.5──→ Node4 ── 7.7──→ Node6 ── 33.8──→ Node7 ── 7.4──→ Node8 ── 1.3──→ Apteryx_mantelli
#>
#> [5] ◎── 24.5──→ Node2 ── 27.9──→ Node3 ── 7.5──→ Node4 ── 7.7──→ Node6 ── 33.8──→ Node7 ── 5.9──→ Node9 ── 2.7──→ Apteryx_owenii
#>
#> [6] ◎── 24.5──→ Node2 ── 27.9──→ Node3 ── 7.5──→ Node4 ── 7.7──→ Node6 ── 33.8──→ Node7 ── 5.9──→ Node9 ── 2.7──→ Apteryx_haastii
#>
#> [7] ◎── 24.5──→ Node2 ── 27.9──→ Node3 ── 7.5──→ Node4 ── 7.7──→ Node6 ── 21.8──→ Node10 ── 20.6──→ Dromaius_novaehollandiae
#>
#> [8] ◎── 24.5──→ Node2 ── 27.9──→ Node3 ── 7.5──→ Node4 ── 7.7──→ Node6 ── 21.8──→ Node10 ── 16.8──→ Node11 ── 3.8──→ Casuarius_casuarius
#>
#> [9] ◎── 24.5──→ Node2 ── 27.9──→ Node3 ── 7.5──→ Node4 ── 7.7──→ Node6 ── 21.8──→ Node10 ── 16.8──→ Node11 ── 3.8──→ Casuarius_bennetti
#>
#> [10] ◎── 24──→ Node2 ── 28──→ Node3 ── 58──→ Struthio_camelus