Convert a character vector into a slim_script object
as_slimr_script(slim_script_text)
A character vector giving the full SLiM script to
convert to a slimr_script
object. Character vectors with length greater than
1 will be concatenated with newline separators
A slimr_script
object
cat(slim_recipes[[1]])
#> // Keywords:
#>
#> // set up a simple neutral simulation
#> initialize()
#> {
#> // set the overall mutation rate
#> initializeMutationRate(1e-7);
#>
#> // m1 mutation type: neutral
#> initializeMutationType("m1", 0.5, "f", 0.0);
#>
#> // g1 genomic element type: uses m1 for all mutations
#> initializeGenomicElementType("g1", m1, 1.0);
#>
#> // uniform chromosome of length 100 kb
#> initializeGenomicElement(g1, 0, 99999);
#>
#> // uniform recombination along the chromosome
#> initializeRecombinationRate(1e-8);
#> }
#>
#> // create a population of 500 individuals
#> 1 early()
#> {
#> sim.addSubpop("p1", 500);
#> }
#>
#> // run to tick 10000
#> 10000 early()
#> {
#> sim.simulationFinished();
#> }
as_slimr_script(slim_recipes[[1]])
#> <slimr_script[3]>
#> block_init_1:initialize() {
#> initializeMutationRate(1e-07);
#> initializeMutationType("m1", 0.5, "f", asFloat(0));
#> initializeGenomicElementType("g1", m1, asFloat(1));
#> initializeGenomicElement(g1, 0, 99999);
#> initializeRecombinationRate(1e-08);
#> }
#>
#> block_2:1 early() {
#> sim.addSubpop("p1", 500);
#> }
#>
#> block_3:10000 early() {
#> sim.simulationFinished();
#> }