Extract data into a genlight object

Extract data into a genlight object

slim_extract_genlight(x, ...)

Arguments

x

slimr_results object containing data generated by r_output using outputFull() in SLiM

...

Arguments passed to or from other methods.

Value

A genlight object

Examples

if(slim_is_avail()) {
  test_sim <- slim_script(
    slim_block_init_minimal(mutation_rate = 1e-6),
    slim_block_add_subpops(1, 100),
    slim_block(1, 20, late(), {
      r_output(sim.outputFull(), "out", do_every = 10)
    })
  ) %>%
    slim_run()
  if(require("adegenet", quietly = TRUE)) {
    plot(slim_extract_genlight(test_sim$output_data))
  }
}
#> 
#> 
#> Simulation finished with exit status: 0
#> 
#> Success!
#> 
#>    /// adegenet 2.1.10 is loaded ////////////
#> 
#>    > overview: '?adegenet'
#>    > tutorials/doc/questions: 'adegenetWeb()' 
#>    > bug reports/feature requests: adegenetIssues()
#>