Create a SLiMR script

Setup a SLiMR script. Each argument should be a call to slim_block. See details for more information.

slim_script(...)

Arguments

...

A list of slim_block objects comprising a SLiM script (written in slimr code)

Value

A slim_script object that can be used with slim_run or converted into a text file for use with SLiM directly using as_slim_text.

Examples

slim_script(
   slim_block(initialize(),
          {
            initializeMutationRate(1e-7);
            initializeMutationType("m1", 0.5, "f", 0.0);
            initializeGenomicElementType("g1", m1, 1.0);
            initializeGenomicElement(g1, 0, 99999);
            initializeRecombinationRate(1e-8);
          }),
   slim_block(1,
          {
            sim.addSubpop("p1", 500);
          }),
   slim_block(10000,
          {
            sim.simulationFinished();
          })
)
#> <slimr_script[3]>
#> block_init:initialize() {
#>     initializeMutationRate(1e-07);
#>     initializeMutationType("m1", 0.5, "f", 0);
#>     initializeGenomicElementType("g1", m1, 1);
#>     initializeGenomicElement(g1, 0, 99999);
#>     initializeRecombinationRate(1e-08);
#> }
#> 
#> block_2:1 early() {
#>     sim.addSubpop("p1", 500);
#> }
#> 
#> block_3:10000 early() {
#>     sim.simulationFinished();
#> }