Documentation for SLiM function uniqueMutationsOfType, which is a method
of the SLiM class Individual.
Note that the R function is a stub, it does not do anything in R (except bring
up this documentation). It will only do
anything useful when used inside a slim_block function further
nested in a slim_script
function call, where it will be translated into valid SLiM code as part of a
full SLiM script.
uniqueMutationsOfType(mutType)An object of type integer or MutationType object. Must be of length 1 (a singleton). See details for description.
An object of type Mutation object.
Documentation for this function can be found in the official SLiM manual: page 685.
Returns an object vector of all the mutations that are of the type specified by mutType, out of all of the mutations in the individual. Mutations present in both genomes will occur only once in the result of this method, and the mutations will be given in sorted order by position, so this method is similar to sortBy(unique(individual.genomes.mutationsOfType(mutType)), "position"). It is not identical to that call, only because if multiple mutations exist at the exact same position, they may be sorted differently by this method than they would be by sortBy(). If you just need a count of the matching Mutation objects, rather than a vector of the matches, use -countOfMutationsOfType(). This method is provided for speed; it is much faster than the corresponding Eidos code. Indeed, it is faster than just individual.genomes.mutationsOfType(mutType), and gives uniquing and sorting on top of that, so it is advantageous unless duplicate entries for homozygous mutations are actually needed.
This is documentation for a function in the SLiM software, and has been reproduced from the official manual, which can be found here: http://benhaller.com/slim/SLiM_Manual.pdf. This documentation is Copyright © 2016-2020 Philipp Messer. All rights reserved. More information about SLiM can be found on the official website: https://messerlab.org/slim/
Other Individual:
Individual,
containsMutations(),
countOfMutationsOfType(),
relatedness(),
setSpatialPosition(),
sharedParentCount(),
sumOfMutationsOfType()